1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g05991

Lfl_g05991 (ATHIR1, HIR1)


Aliases : ATHIR1, HIR1

Description : not classified & original description: none


Gene families : OG0000609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000609_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05991

Target Alias Description ECC score Gene Family Method Actions
Adi_g112719 ATHIR1, HIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12519 ATHIR1, HIR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G003300.1 Ceric.12G003300 not classified & original description: pacid=50600885... 0.04 OrthoFinder output from all 47 species
Ceric.12G036400.1 Ceric.12G036400 not classified & original description: pacid=50601504... 0.02 OrthoFinder output from all 47 species
Dac_g35934 ATHIR1, HIR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g01490.1 No alias Hypersensitive-induced response protein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g08895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001107 Band_7 9 182
No external refs found!