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  5. Lfl_g05463

Lfl_g05463


Description : light chain of clathrin triskelion & original description: none


Gene families : OG0002188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05463

Target Alias Description ECC score Gene Family Method Actions
Aev_g20138 No alias light chain of clathrin triskelion & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g10177 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08248 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06413 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g51510.1 LOC_Os06g51510 light chain of clathrin triskelion 0.05 OrthoFinder output from all 47 species
Len_g30485 No alias light chain of clathrin triskelion & original description: none 0.06 OrthoFinder output from all 47 species
Mp2g03080.1 No alias light chain of clathrin triskelion 0.03 OrthoFinder output from all 47 species
Solyc07g054180.4.1 Solyc07g054180 light chain of clathrin triskelion 0.03 OrthoFinder output from all 47 species
Solyc09g014450.4.1 Solyc09g014450 light chain of clathrin triskelion 0.02 OrthoFinder output from all 47 species
Spa_g04777 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08463 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEA Interproscan
CC GO:0030132 clathrin coat of coated pit IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP HCCA
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000996 Clathrin_L-chain 160 276
No external refs found!