Lfl_g05289

Description : light chain of clathrin triskelion & original description: none

Gene families : OG0002188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002188_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g05289

Target	Alias	Description	ECC score	Gene Family Method
AT2G20760	No alias	Clathrin light chain protein	0.06	OrthoFinder output from all 47 species
Ala_g10177	No alias	light chain of clathrin triskelion & original description: none	0.07	OrthoFinder output from all 47 species
Als_g06151	No alias	light chain of clathrin triskelion & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g06413	No alias	light chain of clathrin triskelion & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g00585	No alias	light chain of clathrin triskelion & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.36G039600.1	Ceric.36G039600	light chain of clathrin triskelion & original...	0.06	OrthoFinder output from all 47 species
Ceric.38G019700.1	Ceric.38G019700	light chain of clathrin triskelion & original...	0.03	OrthoFinder output from all 47 species
Dcu_g07971	No alias	light chain of clathrin triskelion & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g03560	No alias	light chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
Mp2g03080.1	No alias	light chain of clathrin triskelion	0.05	OrthoFinder output from all 47 species
Msp_g03939	No alias	light chain of clathrin triskelion & original description: none	0.06	OrthoFinder output from all 47 species
Nbi_g02810	No alias	light chain of clathrin triskelion & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g30776	No alias	light chain of clathrin triskelion & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c7_10150V3.1	Pp3c7_10150	Clathrin light chain protein	0.02	OrthoFinder output from all 47 species
Solyc02g078540.4.1	Solyc02g078540	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Solyc07g054180.4.1	Solyc07g054180	light chain of clathrin triskelion	0.03	OrthoFinder output from all 47 species
Spa_g04777	No alias	light chain of clathrin triskelion & original description: none	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030118	clathrin coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030125	clathrin vesicle coat	None	Extended
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEA	Interproscan
CC	GO:0030132	clathrin coat of coated pit	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000996	Clathrin_L-chain	185	290

External Links

No external refs found!

Lfl_g05289

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation