Lfl_g04057

Description : not classified & original description: none

Gene families : OG0001057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001057_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g04057
Cluster	HCCA: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00251960	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00032p00209300	evm_27.TU.AmTr_v1...	No description available	0.05	OrthoFinder output from all 47 species
AMTR_s00065p00208780	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AT5G44680	No alias	DNA glycosylase superfamily protein	0.05	OrthoFinder output from all 47 species
AT5G57970	No alias	DNA glycosylase superfamily protein	0.03	OrthoFinder output from all 47 species
Adi_g025572	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g03652	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g14470	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g37787	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.19G064900.1	Ceric.19G064900	not classified & original description: pacid=50575422...	0.03	OrthoFinder output from all 47 species
Ceric.20G003100.1	Ceric.20G003100	not classified & original description: pacid=50566642...	0.04	OrthoFinder output from all 47 species
Ceric.34G042800.1	Ceric.34G042800	not classified & original description: pacid=50623635...	0.03	OrthoFinder output from all 47 species
Ceric.37G026400.1	Ceric.37G026400	not classified & original description: pacid=50615533...	0.04	OrthoFinder output from all 47 species
Dac_g08060	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g07937	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g08465	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g51554	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09099	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
LOC_Os01g58550.1	LOC_Os01g58550	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
LOC_Os04g42290.1	LOC_Os04g42290	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os09g25290.1	LOC_Os09g25290	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_114043g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp3g04160.1	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g03976	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g11422	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g05984	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g20719	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g30259	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g17170	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g082120.3.1	Solyc02g082120	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Spa_g07044	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g08423	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e007660_P001	Zm00001e007660	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e030438_P002	Zm00001e030438	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e041165_P001	Zm00001e041165	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003905	alkylbase DNA N-glycosylase activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006284	base-excision repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	None	Extended
MF	GO:0019104	DNA N-glycosylase activity	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043733	DNA-3-methylbase glycosylase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0001932	regulation of protein phosphorylation	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0008131	primary amine oxidase activity	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0019900	kinase binding	IEP	HCCA
MF	GO:0019901	protein kinase binding	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0042325	regulation of phosphorylation	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0043549	regulation of kinase activity	IEP	HCCA
BP	GO:0045859	regulation of protein kinase activity	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
MF	GO:0048038	quinone binding	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051338	regulation of transferase activity	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005019	Adenine_glyco	247	421

External Links

No external refs found!

Lfl_g04057

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation