Lfl_g03202 (HSFA1B, ATHSF3, HSF3, ATHSFA1B)

Aliases : HSFA1B, ATHSF3, HSF3, ATHSFA1B

Description : transcriptional regulator *(HsfA1) & original description: none

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g03202

Target	Alias	Description	ECC score	Gene Family Method
AT1G67970	HSFA8, AT-HSFA8	heat shock transcription factor A8	0.02	OrthoFinder output from all 47 species
AT3G02990	HSFA1E, ATHSFA1E	heat shock transcription factor A1E	0.03	OrthoFinder output from all 47 species
AT4G19630	No alias	winged-helix DNA-binding transcription factor family protein	0.02	OrthoFinder output from all 47 species
Als_g23011	ATHSF1, HSF1,...	transcriptional regulator *(HsfA1) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g27045	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g25683	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.02G104000.1	ATHSF1, HSF1,...	HSF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.16G045800.1	ATHSF1, HSF1,...	transcriptional regulator *(HsfA1) & original...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000057.99	HSFA1B, ATHSF3,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
Dcu_g07589	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g12135	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01021269001	HSF A4A, AT-HSFA4A	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	OrthoFinder output from all 47 species
LOC_Os01g54550.1	HSFA4C, RHA1,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
LOC_Os06g35960.1	AT-HSFC1, HSFC1,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Lfl_g07776	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g27595	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g19089	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g48747	HSFA1E, ATHSFA1E	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g33147	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g64053	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g09452	No alias	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc12g098520.2.1	AT-HSFA5, HSFA5,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Spa_g11248	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e014583_P001	AT-HSFA5, HSFA5,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Zm00001e020490_P001	AT-HSFA6B,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Zm00001e038685_P001	ATHSF1, HSF1,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	53	142

External Links

No external refs found!

Lfl_g03202 (HSFA1B, ATHSF3, HSF3, ATHSFA1B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation