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Description : mRNA chaperone *(RLSB/BSF) & original description: none
Gene families : OG0002842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002842_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g31939 | |
| Cluster | HCCA: Cluster_89 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00131p00066980 | evm_27.TU.AmTr_v1... | 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g060943 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g084122 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g50340 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g56578 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g16982 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g17119 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g11259 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g21517 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene22512.t1 | Aspi01Gene22512 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene47104.t1 | Aspi01Gene47104 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g60889 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G005900.1 | Ceric.39G005900 | mRNA chaperone *(RLSB/BSF) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g04128 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Dde_g09799 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26475 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01013706001 | No alias | 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea | 0.03 | OrthoFinder output from all 47 species | |
| Gb_23363 | No alias | plastidial mRNA chaperone (RLSB/BSF) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g45920.1 | LOC_Os05g45920 | plastidial mRNA chaperone (RLSB/BSF) | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g26693 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_336179g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g06256 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04958 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g18985 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g15780 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g072036.1.1 | Solyc04g072036 | plastidial mRNA chaperone (RLSB/BSF) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g17865 | No alias | mRNA chaperone *(RLSB/BSF) & original description: none | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004375 | glycine dehydrogenase (decarboxylating) activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006544 | glycine metabolic process | IEP | HCCA |
| BP | GO:0006546 | glycine catabolic process | IEP | HCCA |
| BP | GO:0009063 | amino acid catabolic process | IEP | HCCA |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009071 | serine family amino acid catabolic process | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016054 | organic acid catabolic process | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
| MF | GO:0016642 | oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0017004 | cytochrome complex assembly | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |