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  5. Ala_g31006

Ala_g31006


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g31006

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00129840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.04 OrthoFinder output from all 47 species
AMTR_s00078p00195340 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AT2G01510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Ala_g30861 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29475 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01789.t1 Aspi01Gene01789 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02406.t1 Aspi01Gene02406 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03740.t1 Aspi01Gene03740 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t2 Aspi01Gene25991 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene28051.t3 Aspi01Gene28051 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28263.t1 CRR22, Aspi01Gene28263 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31476.t1 Aspi01Gene31476 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G077100.1 Ceric.04G077100 not classified & original description: pacid=50631154... 0.04 OrthoFinder output from all 47 species
Dde_g35700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_17428 No alias Pentatricopeptide repeat-containing protein At4g04370... 0.05 OrthoFinder output from all 47 species
LOC_Os01g15530.1 LOC_Os01g15530 Pentatricopeptide repeat-containing protein At5g56310... 0.03 OrthoFinder output from all 47 species
LOC_Os12g30620.1 LOC_Os12g30620 Pentatricopeptide repeat-containing protein At3g29230... 0.04 OrthoFinder output from all 47 species
Lfl_g07433 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g21545 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16027 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g29214 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g24441 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34877 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g64685 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05803 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g41474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14002 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15000 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20297 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56457 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 58 101
IPR002885 Pentatricopeptide_repeat 7 38
No external refs found!