Ala_g27603


Description : not classified & original description: none


Gene families : OG0006715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006715_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g27603

Target Alias Description ECC score Gene Family Method Actions
Adi_g012504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g04850 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g31442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G046800.1 Ceric.30G046800 not classified & original description: pacid=50609423... 0.03 OrthoFinder output from all 47 species
Dac_g20710 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g02022 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g09608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os05g49910.1 LOC_Os05g49910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g17914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22005 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g10097 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g14990 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04061 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g25634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo424281 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g48046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!