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  5. Ala_g25553

Ala_g25553 (PHB-1D, ATHB-14, PHB, ATHB14)


Aliases : PHB-1D, ATHB-14, PHB, ATHB14

Description : transcriptional co-regulator *(ZPR) & original description: none


Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g25553

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00155p00069240 PHB-1D, ATHB-14,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
AT2G34710 PHB-1D, ATHB-14,... Homeobox-leucine zipper family protein / lipid-binding... 0.03 OrthoFinder output from all 47 species
AT4G32880 HB-8, ATHB8, ATHB-8 homeobox gene 8 0.03 OrthoFinder output from all 47 species
Aspi01Gene26061.t1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g23262 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G016600.1 IFL1, IFL, REV,... not classified & original description: pacid=50578535... 0.03 OrthoFinder output from all 47 species
Ehy_g07882 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017010001 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01035612001 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
LOC_Os12g41860.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Len_g10334 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26487 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02849 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05442 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08842 No alias transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08843 No alias transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g024070.3.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Solyc03g120910.4.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Zm00001e000073_P001 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Zm00001e005034_P001 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 183 387
IPR013978 MEKHLA 714 862
IPR001356 Homeobox_dom 37 95
No external refs found!