Ala_g24741

Description : DNA primase and helicase *(TWINKLE) & original description: none

Gene families : OG0002154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002154_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g24741
Cluster	HCCA: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
AT1G30680	No alias	toprim domain-containing protein	0.03	OrthoFinder output from all 47 species
Aev_g01337	No alias	DNA primase and helicase *(TWINKLE) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g09763	No alias	DNA primase and helicase *(TWINKLE) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene69210.t1	Aspi01Gene69210	DNA primase and helicase *(TWINKLE) & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g14570	No alias	DNA primase and helicase *(TWINKLE) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.1Z069600.1	Ceric.1Z069600	DNA primase and helicase *(TWINKLE) & original...	0.03	OrthoFinder output from all 47 species
Dde_g11664	No alias	DNA primase and helicase *(TWINKLE) & original description: none	0.03	OrthoFinder output from all 47 species
MA_21134g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Ore_g22672	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g04863	No alias	DNA primase and helicase *(TWINKLE) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g51689	No alias	DNA primase and helicase *(TWINKLE) & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g08851	No alias	DNA primase and helicase *(TWINKLE) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003678	DNA helicase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004402	histone acetyltransferase activity	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006473	protein acetylation	IEP	HCCA
BP	GO:0006475	internal protein amino acid acetylation	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0009306	protein secretion	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016573	histone acetylation	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0018394	peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	HCCA
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071692	protein localization to extracellular region	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006171	TOPRIM_domain	318	412
IPR007694	DNA_helicase_DnaB-like_C	477	727

External Links

No external refs found!

Ala_g24741

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation