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  5. Ala_g21936

Ala_g21936


Description : histone *(H2B) & original description: none


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g21936
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Als_g28637 HTB4 histone *(H2B) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g12643 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17070.t1 HTB4, Aspi01Gene17070 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17082.t1 HTB4, Aspi01Gene17082 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58540.t1 HTB1, Aspi01Gene58540 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_07112 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
Len_g25622 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41321 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60088 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35037 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022201_P001 HTB11, Zm00001e022201 histone (H2B) 0.03 OrthoFinder output from all 47 species
Zm00001e039057_P002 HTB11, Zm00001e039057 histone (H2B) 0.02 OrthoFinder output from all 47 species
Zm00001e041296_P001 HTB11, Zm00001e041296 histone (H2B) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 30 140
No external refs found!