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  5. Ala_g20458

Ala_g20458


Description : subfamily ABCD transporter & original description: none


Gene families : OG0002493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002493_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g20458
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Dac_g14149 No alias subfamily ABCD transporter & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18919 No alias subfamily ABCD transporter & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48408 No alias subfamily ABCD transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30885 No alias subfamily ABCD transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02792 No alias subfamily ABCD transporter & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 45 309
IPR003439 ABC_transporter-like_ATP-bd 427 567
No external refs found!