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Aliases : MRL1
Description : rbcL-mRNA stability factor *(MRL1) & original description: none
Gene families : OG0004421 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004421_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g16036 | |
| Cluster | HCCA: Cluster_89 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00224p00011500 | MRL1,... | Pentatricopeptide repeat-containing protein MRL1,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00357p00011320 | MRL1,... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00451p00003410 | MRL1,... | Pentatricopeptide repeat-containing protein MRL1,... | 0.06 | OrthoFinder output from all 47 species | |
| AT4G34830 | MRL1 | Pentatricopeptide repeat (PPR) superfamily protein | 0.09 | OrthoFinder output from all 47 species | |
| Aev_g07991 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g02579 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aob_g03622 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Aop_g11874 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene25377.t1 | MRL1, Aspi01Gene25377 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g02698 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.28G061200.1 | Ceric.28G061200 | rbcL-mRNA stability factor *(MRL1) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g12659 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g03176 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g21513 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g10337 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01024119001 | MRL1 | Pentatricopeptide repeat-containing protein MRL1,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_33501 | MRL1 | Pentatricopeptide repeat-containing protein MRL1,... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os10g10170.1 | MRL1, LOC_Os10g10170 | Pentatricopeptide repeat-containing protein MRL1,... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g04362 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g02395 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| MA_10429571g0010 | MRL1 | Pentatricopeptide repeat-containing protein MRL1,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_122602g0010 | MRL1 | Pentatricopeptide repeat-containing protein MRL1,... | 0.07 | OrthoFinder output from all 47 species | |
| Mp3g17160.1 | MRL1 | Pentatricopeptide repeat-containing protein MRL1,... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g25355 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g03133 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08612 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g17500 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pnu_g08167 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g003951 | No alias | rbcL-mRNA stability factor *(MRL1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12546 | No alias | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Smo115078 | MRL1 | Pentatricopeptide repeat-containing protein MRL1,... | 0.02 | OrthoFinder output from all 47 species | |
| Smo169254 | MRL1 | Pentatricopeptide repeat-containing protein MRL1,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g111020.3.1 | MRL1, Solyc01g111020 | Pentatricopeptide repeat-containing protein MRL1,... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g01352 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g02143 | MRL1 | rbcL-mRNA stability factor *(MRL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e002719_P003 | MRL1, Zm00001e002719 | Pentatricopeptide repeat-containing protein MRL1,... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004375 | glycine dehydrogenase (decarboxylating) activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006544 | glycine metabolic process | IEP | HCCA |
| BP | GO:0006546 | glycine catabolic process | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009063 | amino acid catabolic process | IEP | HCCA |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009071 | serine family amino acid catabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016054 | organic acid catabolic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
| MF | GO:0016642 | oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016851 | magnesium chelatase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | HCCA |
| MF | GO:0051002 | ligase activity, forming nitrogen-metal bonds | IEP | HCCA |
| MF | GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | HCCA |
| No external refs found! |