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  5. Ala_g13109

Ala_g13109 (ATHSF1, HSF1, HSFA1A, ATHSFA1A)


Aliases : ATHSF1, HSF1, HSFA1A, ATHSFA1A

Description : transcriptional regulator *(HsfA1) & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g13109

Target Alias Description ECC score Gene Family Method Actions
AT1G77570 No alias Winged helix-turn-helix transcription repressor DNA-binding 0.02 OrthoFinder output from all 47 species
Aspi01Gene69372.t1 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07626 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g18540 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13545 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_124940g0010 HSF4, HSFB1,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Msp_g13363 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47116 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19094 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30272 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62641 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016889 HSFA1E, ATHSFA1E transcriptional regulator *(HsfA1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g20054 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020490_P001 AT-HSFA6B,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 52 141
No external refs found!