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  5. Ala_g12871

Ala_g12871 (ATRAB18, RAB18-1,...)


Aliases : ATRAB18, RAB18-1, ATRABC1, RAB18, RABC1, ATRAB-C1

Description : C-class RAB GTPase & original description: none


Gene families : OG0002991 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g12871
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT5G03530 ATRAB ALPHA,... RAB GTPase homolog C2A 0.02 OrthoFinder output from all 47 species
Aop_g02461 ATRAB18,... C-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G043900.1 ATRAB18,... C-class RAB GTPase & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g03192 ATRAB18,... C-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g008460.3.1 ATRAB ALPHA,... C-class RAB GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 64 225
No external refs found!