Ala_g12613 (KCS4)

Aliases : KCS4

Description : 3-ketoacyl-CoA synthase *(KCS) & original description: none

Gene families : OG0000066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g12613

Target	Alias	Description	ECC score	Gene Family Method
Adi_g060055	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g03997	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.07	OrthoFinder output from all 47 species
Aev_g48853	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g21709	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene18203.t1	KCS4, Aspi01Gene18203	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.06	OrthoFinder output from all 47 species
Cba_g25219	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.36G023900.1	KCS4, Ceric.36G023900	3-ketoacyl-CoA synthase *(KCS) & original description:...	0.06	OrthoFinder output from all 47 species
GSVIVT01015472001	KCS11	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	OrthoFinder output from all 47 species
Gb_20097	KCS4	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
Gb_23820	KCS11	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species
LOC_Os05g49290.1	KCS4, LOC_Os05g49290	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
Lfl_g05573	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.05	OrthoFinder output from all 47 species
Msp_g01615	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.08	OrthoFinder output from all 47 species
Pir_g10767	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g24617	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g26106	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g08148	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g29175	KCS20	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019527	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1263	0.03	OrthoFinder output from all 47 species
Spa_g22293	KCS17	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g03936	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e032463_P001	KCS4, Zm00001e032463	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010215	cellulose microfibril organization	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0030198	extracellular matrix organization	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043062	extracellular structure organization	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013601	FAE1_typ3_polyketide_synth	96	385
IPR013747	ACP_syn_III_C	402	482

External Links

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Ala_g12613 (KCS4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation