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  5. Ala_g11511

Ala_g11511 (TIC)


Aliases : TIC

Description : regulatory protein *(TIC) of circadian clock & original description: none


Gene families : OG0000917 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000917_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g11511

Target Alias Description ECC score Gene Family Method Actions
Adi_g007062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g011963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g057583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32955 No alias regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0476.g073010 No alias regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Cba_g78003 No alias regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Ceric.11G088100.1 Ceric.11G088100 regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Ceric.23G047200.1 Ceric.23G047200 regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Ceric.37G014700.1 Ceric.37G014700 regulatory protein *(TIC) of circadian clock & original... 0.04 OrthoFinder output from all 47 species
Ehy_g17052 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g18278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21133 No alias regulatory protein *(TIC) of circadian clock & original... 0.02 OrthoFinder output from all 47 species
Len_g30742 No alias regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Lfl_g07448 No alias regulatory protein *(TIC) of circadian clock & original... 0.04 OrthoFinder output from all 47 species
Nbi_g10369 TIC regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Ore_g04817 No alias regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Ore_g21131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25564 No alias regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Sam_g36159 No alias regulatory protein *(TIC) of circadian clock & original... 0.04 OrthoFinder output from all 47 species
Spa_g17875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56228 No alias regulatory protein *(TIC) of circadian clock & original... 0.03 OrthoFinder output from all 47 species
Tin_g13988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!