Aliases : LDL3
Description : histone demethylase *(KDM1d) & original description: none
Gene families : OG0003426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003426_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G16310 | LDL3 | LSD1-like 3 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g011994 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aev_g06185 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g22303 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aob_g13453 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g27045 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene46596.t2 | LDL3, Aspi01Gene46596 | histone demethylase *(KDM1d) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g14216 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.04G013700.1 | LDL3, Ceric.04G013700 | histone demethylase *(KDM1d) & original description:... | 0.07 | OrthoFinder output from all 47 species | |
Ceric.12G094400.1 | LDL3, Ceric.12G094400 | histone demethylase *(KDM1d) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g10965 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g10966 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g23597 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01009833001 | LDL3 | Lysine-specific histone demethylase 1 homolog 3... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01009834001 | LDL3 | Lysine-specific histone demethylase 1 homolog 3... | 0.07 | OrthoFinder output from all 47 species | |
Gb_40614 | LDL3 | lysine-specific demethylase (LDL3) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os10g38850.1 | LDL3, LOC_Os10g38850 | lysine-specific demethylase (LDL3) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g04294 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
MA_120420g0020 | LDL3 | lysine-specific demethylase (LDL3) | 0.05 | OrthoFinder output from all 47 species | |
Msp_g14381 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g08319 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Ore_g28867 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g11421 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Pir_g15135 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g02424 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g36106 | No alias | histone demethylase *(KDM1d) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Smo405878 | LDL3 | Chromatin organisation.histone modifications.histone... | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g081100.3.1 | LDL3, Solyc04g081100 | lysine-specific demethylase (LDL3) | 0.07 | OrthoFinder output from all 47 species | |
Spa_g10310 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Spa_g26760 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g08531 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e002184_P001 | LDL3, Zm00001e002184 | lysine-specific demethylase (LDL3) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
CC | GO:0030688 | preribosome, small subunit precursor | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |