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  5. Ala_g09121

Ala_g09121 (PHS1)


Aliases : PHS1

Description : pyrimidine reductase *(PyrR) & original description: none


Gene families : OG0003101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g09121
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00232340 PHS1,... Coenzyme metabolism.FMN/FAD biosynthesis.pyrimidine reductase 0.03 OrthoFinder output from all 47 species
Als_g05011 PHS1 pyrimidine reductase *(PyrR) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene02762.t1 PHS1, Aspi01Gene02762 pyrimidine reductase *(PyrR) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g71712 PHS1 pyrimidine reductase *(PyrR) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21112 PHS1 pyrimidine reductase *(PyrR) & original description: none 0.03 OrthoFinder output from all 47 species
MA_118876g0010 PHS1 Riboflavin biosynthesis protein PYRR, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_7675554g0010 PHS1 pyrimidine reductase 0.07 OrthoFinder output from all 47 species
MA_9222330g0010 PHS1 pyrimidine reductase 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018428 PHS1 pyrimidine reductase *(PyrR) & original description: CDS=196-1974 0.02 OrthoFinder output from all 47 species
Sam_g49263 No alias pyrimidine reductase *(PyrR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014552_P002 PHS1, Zm00001e014552 pyrimidine reductase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEA Interproscan
BP GO:0009231 riboflavin biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002734 RibDG_C 174 375
IPR012816 NADAR 414 566
No external refs found!