Ala_g08360


Description : not classified & original description: none


Gene families : OG0003616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003616_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g08360

Target Alias Description ECC score Gene Family Method Actions
AT3G17470 ATCRSH, CRSH Ca2+-activated RelA/spot homolog 0.03 OrthoFinder output from all 47 species
Als_g17646 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24495 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g35281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430581g0010 ATCRSH, CRSH Probable GTP diphosphokinase CRSH, chloroplastic... 0.05 OrthoFinder output from all 47 species
Ore_g06700 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g098920.2.1 ATCRSH, CRSH,... Probable GTP diphosphokinase CRSH, chloroplastic... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!