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  5. Ala_g05845

Ala_g05845


Description : not classified & original description: none


Gene families : OG0006891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006891_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g05845
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00092530 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Aev_g03021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01122 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene06565.t1 Aspi01Gene06565 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001095.26 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Cre08.g381516 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.07 OrthoFinder output from all 47 species
Dac_g01481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g39040.1 LOC_Os06g39040 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
MA_173903g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 44 246
No external refs found!