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  5. Ala_g05797

Ala_g05797 (TPR16)


Aliases : TPR16

Description : not classified & original description: none


Gene families : OG0001935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001935_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g05797

Target Alias Description ECC score Gene Family Method Actions
AT5G12430 TPR16 Heat shock protein DnaJ with tetratricopeptide repeat 0.03 OrthoFinder output from all 47 species
Adi_g087219 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre02.g108800 TPR16 No description available 0.02 OrthoFinder output from all 47 species
Mp3g16220.1 TPR16 TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc11g065260.3.1 TPR16, Solyc11g065260 TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g07530 TPR16 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140223 general transcription initiation factor activity IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 1656 1739
No external refs found!