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  5. Ala_g05684

Ala_g05684


Description : assembly factor CcsB of CCS cytochrome f/c6 maturation system (system II) & original description: none


Gene families : OG0005948 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005948_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g05684

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00156080 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
Adi_g012769 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.08 OrthoFinder output from all 47 species
Aob_g16302 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species
Aspi01Gene04834.t1 Aspi01Gene04834 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Cre13.g575000 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Dcu_g03888 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species
Ehy_g04866 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
GSVIVT01031911001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
Gb_26769 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
MA_10434753g0010 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Mp3g21290.1 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Nbi_g19038 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.08 OrthoFinder output from all 47 species
Ore_g05642 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Pir_g61712 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Sam_g52379 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Smo52887 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Spa_g12033 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Zm00001e005813_P001 Zm00001e005813 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR007816 ResB-like_domain 159 424
IPR007816 ResB-like_domain 454 570
No external refs found!