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  5. Ala_g05148

Ala_g05148 (CSI1)


Aliases : CSI1

Description : cellulose synthase CSC-interactive protein *(CSI) & original description: none


Gene families : OG0001114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g05148

Target Alias Description ECC score Gene Family Method Actions
Als_g23028 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Als_g52429 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Aob_g11491 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Dcu_g49114 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
MA_10313835g0010 CSI1 Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10435637g0040 CSI1 Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_164980g0010 No alias CSI-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species
Mp5g20900.1 CSI1 CSI-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species
Msp_g15084 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Solyc04g054480.3.1 CSI1, Solyc04g054480 CSI-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species
Zm00001e030842_P001 CSI1, Zm00001e030842 Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 2016 2114
IPR000225 Armadillo 507 542
No external refs found!