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  5. Ala_g04195

Ala_g04195 (ATGCN5, GCN5)


Aliases : ATGCN5, GCN5

Description : not classified & original description: none


Gene families : OG0003045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g04195
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00247660 ATGCN5, GCN5,... ABC transporter F family member 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT5G64840 ATGCN5, GCN5 general control non-repressible 5 0.07 OrthoFinder output from all 47 species
Adi_g057121 ATGCN5, GCN5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g12591 ATGCN5, GCN5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16234 ATGCN5, GCN5 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aob_g02291 ATGCN5, GCN5 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g07329 ATGCN5, GCN5 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aspi01Gene62480.t1 ATGCN5, GCN5,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0168.g054635 ATGCN5, GCN5 not classified & original description: CDS=239-2245 0.05 OrthoFinder output from all 47 species
Cba_g38272 ATGCN5, GCN5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.29G008900.1 ATGCN5, GCN5,... not classified & original description: pacid=50624672... 0.15 OrthoFinder output from all 47 species
Cre06.g265100 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre06.g271850 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre08.g372250 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Dac_g12683 ATGCN5, GCN5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g28626 ATGCN5, GCN5 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g07651 ATGCN5, GCN5 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ehy_g07834 ATGCN5, GCN5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01022235001 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_01082 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_01083 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os11g39020.1 ATGCN5, GCN5,... ABC transporter F family member 5 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Len_g13114 ATGCN5, GCN5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07903 ATGCN5, GCN5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10437027g0010 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Mp7g11090.1 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g14610 ATGCN5, GCN5 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g30372 ATGCN5, GCN5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g11340 ATGCN5, GCN5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15434 ATGCN5, GCN5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020515 ATGCN5, GCN5 not classified & original description: CDS=75-2189 0.03 OrthoFinder output from all 47 species
Sam_g19383 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Solyc04g051800.3.1 ATGCN5, GCN5,... ABC transporter F family member 5 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Spa_g18685 ATGCN5, GCN5 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g11682 ATGCN5, GCN5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e011297_P001 ATGCN5, GCN5,... ABC transporter F family member 5 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 133 308
IPR032781 ABC_tran_Xtn 347 434
IPR003439 ABC_transporter-like_ATP-bd 462 592
No external refs found!