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  5. Ala_g02732

Ala_g02732


Description : not classified & original description: none


Gene families : OG0005532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005532_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02732
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00185250 evm_27.TU.AmTr_v1... BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G45540 No alias WD-40 repeat family protein / beige-related 0.07 OrthoFinder output from all 47 species
Adi_g107386 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05546 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08158 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene29586.t1 Aspi01Gene29586 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z002100.1 Ceric.1Z002100 not classified & original description: pacid=50637203... 0.03 OrthoFinder output from all 47 species
Dcu_g11295 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g50882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027547001 No alias BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_14861 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os04g46892.1 LOC_Os04g46892 BEACH domain-containing protein C2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os04g46894.1 LOC_Os04g46894 BEACH domain-containing protein C2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g29845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_124819g0010 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_16421g0010 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp6g16270.1 No alias BEACH domain-containing protein C2 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Msp_g13656 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g08434 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g16690 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g06934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08777 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Smo60006 No alias BEACH domain-containing protein C2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc01g094050.1.1 Solyc01g094050 BEACH domain-containing protein C2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc01g094060.4.1 Solyc01g094060 BEACH domain-containing protein C2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e007294_P001 Zm00001e007294 BEACH domain-containing protein C2 OS=Arabidopsis... 0.11 OrthoFinder output from all 47 species
Zm00001e015356_P001 Zm00001e015356 BEACH domain-containing protein C2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000409 BEACH_dom 2528 2804
IPR046851 NBCH_WD40 2926 3149
IPR023362 PH-BEACH_dom 2404 2500
IPR031570 NBEA/BDCP_DUF4704 892 1207
IPR031570 NBEA/BDCP_DUF4704 1412 1558
No external refs found!