Ala_g02563 (WRKY4)

Aliases : WRKY4

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g02563

Target	Alias	Description	ECC score	Gene Family Method
Ala_g05188	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Ala_g10395	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g21159	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g33440	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g39367	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g32004	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g60353	WRKY23, ATWRKY23	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene24680.t1	WRKY43,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene39448.t1	WRKY3, Aspi01Gene39448	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene52920.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g19526	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.17G009500.1	ATWRKY57,...	WRKY-type transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Dcu_g04056	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g04829	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g05926	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g18841	WRKY62, ATWRKY62	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g30810	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g46910	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Gb_08731	ATWRKY57, WRKY57	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os07g48260.1	WRKY54,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_268327g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_7831917g0010	AtWRKY47, WRKY47	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp6g16800.1	WRKY48, ATWRKY48	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Msp_g11048	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g26422	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g29117	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g03566	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g04900	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g34445	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63011	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63386	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g05178	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g10405	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g095630.3.1	AtWRKY41,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc02g032950.3.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc03g007380.2.1	AtWRKY41,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc05g050340.4.1	WRKY55,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Spa_g07958	WRKY67, ATWRKY67	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g08676	WRKY2, ATWRKY2	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g32456	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e033860_P001	ATWRKY30,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	493	549
IPR003657	WRKY_dom	325	380

External Links

No external refs found!

Ala_g02563 (WRKY4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation