Ala_g00332

Description : component *(eS17) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0001873 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001873_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g00332

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00030p00243530	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.05	OrthoFinder output from all 47 species
AT3G10610	No alias	Ribosomal S17 family protein	0.03	OrthoFinder output from all 47 species
AT5G04800	No alias	Ribosomal S17 family protein	0.03	OrthoFinder output from all 47 species
Adi_g017904	No alias	component *(eS17) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Ala_g19425	No alias	component *(eS17) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Aop_g12251	No alias	component *(eS17) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Aop_g30259	No alias	component *(eS17) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Cba_g01433	No alias	component *(eS17) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Ceric.34G043500.1	Ceric.34G043500	component *(eS17) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Cre12.g498250	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.04	OrthoFinder output from all 47 species
Dac_g26225	No alias	component *(eS17) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Gb_20256	No alias	component RPS17 of SSU proteome	0.03	OrthoFinder output from all 47 species
MA_184894g0010	No alias	component RPS17 of SSU proteome	0.04	OrthoFinder output from all 47 species
Mp8g18950.1	No alias	component RPS17 of SSU proteome	0.04	OrthoFinder output from all 47 species
Pp3c11_2540V3.1	Pp3c11_2540	Ribosomal S17 family protein	0.03	OrthoFinder output from all 47 species
Pp3c2_34780V3.1	Pp3c2_34780	Ribosomal S17 family protein	0.02	OrthoFinder output from all 47 species
Ppi_g57893	No alias	component *(eS17) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Sam_g12734	No alias	component *(eS17) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Smo270936	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.03	OrthoFinder output from all 47 species
Solyc10g150146.1.1	Solyc10g150146	component RPS17 of SSU proteome	0.03	OrthoFinder output from all 47 species
Solyc11g006690.1.1	Solyc11g006690	component RPS17 of SSU proteome	0.02	OrthoFinder output from all 47 species
Spa_g10597	No alias	component *(eS17) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Tin_g00206	No alias	component *(eS17) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0001932	regulation of protein phosphorylation	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
MF	GO:0008800	beta-lactamase activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016812	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides	IEP	HCCA
BP	GO:0016999	antibiotic metabolic process	IEP	HCCA
BP	GO:0017001	antibiotic catabolic process	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0019900	kinase binding	IEP	HCCA
MF	GO:0019901	protein kinase binding	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0030653	beta-lactam antibiotic metabolic process	IEP	HCCA
BP	GO:0030655	beta-lactam antibiotic catabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0042325	regulation of phosphorylation	IEP	HCCA
BP	GO:0043549	regulation of kinase activity	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0045859	regulation of protein kinase activity	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051338	regulation of transferase activity	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0072338	lactam metabolic process	IEP	HCCA
BP	GO:0072340	lactam catabolic process	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001210	Ribosomal_S17e	1	119

External Links

No external refs found!

Ala_g00332

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation