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  5. Msp_g48346

Msp_g48346 (GAD2)


Aliases : GAD2

Description : not classified & original description: none


Gene families : OG0002017 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g48346

Target Alias Description ECC score Gene Family Method Actions
Ala_g26209 emb1075 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22208.t1 emb1075, Aspi01Gene22208 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22209.t1 emb1075, Aspi01Gene22209 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02605 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g44525 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g15345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19174 emb1075 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp5g24130.1 emb1075 Serine decarboxylase 2 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Nbi_g37246 emb1075 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27313 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g60370 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g63978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000639 No alias not classified & original description: CDS=38-1963 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000654 No alias not classified & original description: CDS=619-2565 0.03 OrthoFinder output from all 47 species
Sam_g22963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo270727 emb1075 Histidine decarboxylase OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 325 484
No external refs found!