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  5. Msp_g48098

Msp_g48098


Description : substrate adaptor of CUL3-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0001445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001445_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g48098

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00166010 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At3g50780... 0.03 OrthoFinder output from all 47 species
AT3G50780 No alias BEST Arabidopsis thaliana protein match is: BTB/POZ... 0.04 OrthoFinder output from all 47 species
Als_g16155 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g24857 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g06194 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Azfi_s0447.g070683 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g78936 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.32G058100.1 Ceric.32G058100 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.37G060600.1 Ceric.37G060600 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dac_g05132 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Dac_g12484 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dcu_g34094 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
LOC_Os04g49060.1 LOC_Os04g49060 BTB/POZ domain-containing protein At1g63850... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03150.3 LOC_Os07g03150 BTB/POZ domain-containing protein At3g50780... 0.03 OrthoFinder output from all 47 species
LOC_Os07g15600.1 LOC_Os07g15600 BTB/POZ domain-containing protein At2g13690... 0.03 OrthoFinder output from all 47 species
LOC_Os12g08720.1 LOC_Os12g08720 BTB/POZ domain-containing protein At2g13690... 0.04 OrthoFinder output from all 47 species
Lfl_g03334 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Lfl_g19920 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
MA_17820g0010 No alias BTB/POZ domain-containing protein At1g63850... 0.02 OrthoFinder output from all 47 species
Nbi_g07125 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Nbi_g09750 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g30790 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g10669 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g13729 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Smo270367 No alias BTB/POZ domain-containing protein At1g63850... 0.03 OrthoFinder output from all 47 species
Solyc02g089950.2.1 Solyc02g089950 BTB/POZ domain-containing protein At3g50780... 0.04 OrthoFinder output from all 47 species
Solyc11g005950.2.1 Solyc11g005950 BTB/POZ domain-containing protein At2g13690... 0.02 OrthoFinder output from all 47 species
Spa_g12525 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Zm00001e005810_P001 Zm00001e005810 BTB/POZ domain-containing protein At3g50780... 0.03 OrthoFinder output from all 47 species
Zm00001e033246_P001 Zm00001e033246 BTB/POZ domain-containing protein At2g13690... 0.05 OrthoFinder output from all 47 species
Zm00001e041407_P001 Zm00001e041407 BTB/POZ domain-containing protein At1g63850... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!