Msp_g46850


Description : not classified & original description: none


Gene families : OG0000872 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000872_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g46850

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00164570 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g32257 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g28926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31744 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.02G034600.1 Ceric.02G034600 not classified & original description: pacid=50586050... 0.05 OrthoFinder output from all 47 species
Ceric.12G071000.1 Ceric.12G071000 not classified & original description: pacid=50601927... 0.02 OrthoFinder output from all 47 species
Dde_g47475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035043001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g38660.1 LOC_Os01g38660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g30526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g049210.1.1 Solyc12g049210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g11578 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g11579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e030288_P001 Zm00001e030288 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021899 DUF3511 130 173
No external refs found!