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  5. Msp_g45483

Msp_g45483


Description : not classified & original description: none


Gene families : OG0000130 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000130_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g45483

Target Alias Description ECC score Gene Family Method Actions
AT5G49120 No alias Protein of unknown function (DUF581) 0.02 OrthoFinder output from all 47 species
Ala_g06923 No alias regulatory protein *(FLZ) of SnRK1 complex & original... 0.03 OrthoFinder output from all 47 species
Als_g62234 No alias regulatory protein *(FLZ) of SnRK1 complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g27022 No alias regulatory protein *(FLZ) of SnRK1 complex & original... 0.05 OrthoFinder output from all 47 species
Ceric.06G081300.1 Ceric.06G081300 regulatory protein *(FLZ) of SnRK1 complex & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g08520.1 LOC_Os01g08520 SnRK1-interacting factor (FLZ) 0.02 OrthoFinder output from all 47 species
LOC_Os02g46210.1 LOC_Os02g46210 SnRK1-interacting factor (FLZ) 0.05 OrthoFinder output from all 47 species
LOC_Os03g46260.1 LOC_Os03g46260 SnRK1-interacting factor (FLZ) 0.03 OrthoFinder output from all 47 species
LOC_Os04g49660.1 LOC_Os04g49660 SnRK1-interacting factor (FLZ) 0.02 OrthoFinder output from all 47 species
LOC_Os11g43790.1 LOC_Os11g43790 SnRK1-interacting factor (FLZ) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012334 No alias not classified & original description: CDS=1-924 0.03 OrthoFinder output from all 47 species
Sam_g16943 No alias regulatory protein *(FLZ) of SnRK1 complex & original... 0.02 OrthoFinder output from all 47 species
Solyc07g042190.3.1 Solyc07g042190 SnRK1-interacting factor (FLZ) 0.02 OrthoFinder output from all 47 species
Zm00001e000615_P001 Zm00001e000615 SnRK1-interacting factor (FLZ) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!