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  5. Msp_g43485

Msp_g43485


Description : not classified & original description: none


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g43485

Target Alias Description ECC score Gene Family Method Actions
Aev_g15432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39954 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g42862 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g46356 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g48387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13417 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene00116.t1 Aspi01Gene00116 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06550.t1 Aspi01Gene06550 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07993.t1 Aspi01Gene07993 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12490.t1 Aspi01Gene12490 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12840.t1 ORF107E, Aspi01Gene12840 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12842.t1 ORF107E, Aspi01Gene12842 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18305.t1 Aspi01Gene18305 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32311.t1 Aspi01Gene32311 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32795.t1 Aspi01Gene32795 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50872.t1 Aspi01Gene50872 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60136.t1 ORF158, Aspi01Gene60136 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70225.t1 ORF158, Aspi01Gene70225 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g68748 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000204.103 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.04 OrthoFinder output from all 47 species
Pir_g06854 ORF158 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g44046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21805 ORF158 not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041577 RT_RNaseH_2 54 115
No external refs found!