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  5. Msp_g43247

Msp_g43247


Description : not classified & original description: none


Gene families : OG0001028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g43247
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Aob_g01905 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000402.5 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020934.54 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc07g065810.2.1 Solyc07g065810 E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc12g015800.2.1 Solyc12g015800 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e020043_P002 Zm00001e020043 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 133 175
No external refs found!