1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g42845

Msp_g42845


Description : substrate adaptor *(FBS) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0001990 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001990_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g42845
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT1G61340 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
Ala_g28361 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.11 OrthoFinder output from all 47 species
Als_g08740 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.17 OrthoFinder output from all 47 species
Als_g13408 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.14 OrthoFinder output from all 47 species
Aop_g05457 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aop_g11326 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.11 OrthoFinder output from all 47 species
Ceric.01G076500.1 Ceric.01G076500 substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.08 OrthoFinder output from all 47 species
Ceric.05G056900.1 Ceric.05G056900 substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
Ceric.12G033400.1 Ceric.12G033400 substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.09 OrthoFinder output from all 47 species
Dac_g02785 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Dac_g15393 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dcu_g09432 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.09 OrthoFinder output from all 47 species
GSVIVT01006513001 No alias F-box protein At4g35930 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_30100 No alias F-box protein At4g35930 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os10g30280.1 LOC_Os10g30280 F-box protein At4g35930 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g14639 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Ppi_g14675 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g62452 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
Sam_g24407 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
Solyc03g033390.3.1 Solyc03g033390 F-box protein At4g35930 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Spa_g06134 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Spa_g52237 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Tin_g08863 No alias substrate adaptor *(FBS) of SCF E3 ubiquiTin ligase... 0.13 OrthoFinder output from all 47 species
Tin_g12923 No alias substrate adaptor *(FBS) of SCF E3 ubiquiTin ligase... 0.05 OrthoFinder output from all 47 species
Zm00001e010551_P001 Zm00001e010551 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!