Msp_g38927 (GAMMA-H2AX, H2AXB,...)

Aliases : GAMMA-H2AX, H2AXB, HTA3, G-H2AX

Description : histone *(H2A) & original description: none

Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g38927
Cluster	HCCA: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
Dde_g15493	HTA6	histone *(H2A) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g00069	GAMMA-H2AX,...	histone *(H2A) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g03105	GAMMA-H2AX,...	histone *(H2A) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	91	112
IPR007125	Histone_H2A/H2B/H3	8	88

External Links

No external refs found!