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Description : component *(uS10) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0001982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001982_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g36291 | |
| Cluster | HCCA: Cluster_83 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00105050 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G45030 | No alias | Ribosomal protein S10p/S20e family protein | 0.07 | OrthoFinder output from all 47 species | |
| AT3G47370 | No alias | Ribosomal protein S10p/S20e family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G62300 | No alias | Ribosomal protein S10p/S20e family protein | 0.08 | OrthoFinder output from all 47 species | |
| Ala_g32242 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Als_g22907 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g24984 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g00267 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0104.g044711 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G040000.1 | Ceric.10G040000 | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000842.28 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Cre16.g660150 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g24923 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g14530.1 | LOC_Os03g14530 | component RPS20 of SSU proteome | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os06g04290.1 | LOC_Os06g04290 | component RPS20 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Len_g44279 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04390 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g30910 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| MA_103406g0010 | No alias | component RPS20 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| MA_10429759g0010 | No alias | component RPS20 of SSU proteome | 0.07 | OrthoFinder output from all 47 species | |
| Mp2g09440.1 | No alias | component RPS20 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g24561 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g21012 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g45562 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g37652 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0064.g015887 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g23471 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc01g096580.3.1 | Solyc01g096580 | component RPS20 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| Solyc01g096590.3.1 | Solyc01g096590 | component RPS20 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g27726 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001045_P001 | Zm00001e001045 | component RPS20 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e036579_P001 | Zm00001e036579 | component RPS20 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e038574_P001 | Zm00001e038574 | component RPS20 of SSU proteome | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | HCCA |
| MF | GO:0004568 | chitinase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | HCCA |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | HCCA |
| BP | GO:0006030 | chitin metabolic process | IEP | HCCA |
| BP | GO:0006032 | chitin catabolic process | IEP | HCCA |
| BP | GO:0006040 | amino sugar metabolic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
| CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
| BP | GO:0046348 | amino sugar catabolic process | IEP | HCCA |
| BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | HCCA |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027486 | Ribosomal_S10_dom | 58 | 152 |
| No external refs found! |