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  5. Msp_g31579

Msp_g31579


Description : cation exchanger *(NCL/EF-CAX) & original description: none


Gene families : OG0000757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g31579
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G29025 No alias Calcium-binding EF-hand family protein 0.02 OrthoFinder output from all 47 species
Adi_g015835 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g047643 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28095 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.11 OrthoFinder output from all 47 species
Als_g14648 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29281 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g59636 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.1 OrthoFinder output from all 47 species
Aspi01Gene07327.t2 Aspi01Gene07327 cation exchanger *(NCL/EF-CAX) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0009.g011783 No alias cation exchanger *(NCL/EF-CAX) & original description:... 0.03 OrthoFinder output from all 47 species
Len_g34847 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.1 OrthoFinder output from all 47 species
Lfl_g16288 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.07 OrthoFinder output from all 47 species
Mp8g02300.1 No alias cation exchanger (NCL/EF-CAX) 0.04 OrthoFinder output from all 47 species
Mp8g02310.1 No alias cation exchanger (NCL/EF-CAX) 0.04 OrthoFinder output from all 47 species
Mp8g02320.1 No alias cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Nbi_g10648 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.15 OrthoFinder output from all 47 species
Pir_g66454 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59906 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.11 OrthoFinder output from all 47 species
Sam_g13051 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23473 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52188 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 324 386
IPR004837 NaCa_Exmemb 439 580
IPR004837 NaCa_Exmemb 103 278
No external refs found!