Heatmap: Cluster_4 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Fertile Leaflet with Sori
Primary Rachis
Secondary Rachis
Petiole
Crozier
Rhizome
Root
-4.15 - - - 0.44 2.18 0.08
-1.66 -2.15 -2.18 -2.02 0.64 1.69 0.27
-3.23 -2.12 -2.91 -1.35 -0.38 2.13 -0.02
-1.21 -0.75 -1.02 -0.81 0.39 1.39 -0.03
Msp_g00992 (TET10)
-7.23 - -7.37 - 0.7 2.07 0.23
-3.43 -1.98 -4.23 -1.73 0.71 1.97 -0.41
-3.31 -5.84 -4.57 -5.94 0.71 2.17 -0.54
-1.64 - -2.84 -2.45 -0.29 2.28 -0.56
-3.38 - - - 0.53 2.44 -5.25
-2.71 -2.82 -2.42 -2.68 0.72 2.24 -
-4.36 -4.03 -6.17 -3.74 0.54 1.99 0.47
- - - - 0.74 2.17 -0.28
-8.51 -5.0 -5.9 -5.77 0.87 2.14 -0.5
Msp_g05311 (TET8)
-1.69 -6.22 - -4.31 0.47 2.01 0.26
- - - - 0.64 2.23 -0.41
Msp_g05511 (PEX2)
-3.81 -1.88 -4.3 -2.91 0.67 1.94 0.06
-1.4 -1.62 -1.75 -1.35 0.2 1.78 0.05
-1.73 - - - -2.31 1.98 1.36
-3.58 -6.22 -5.51 -7.36 -0.59 2.39 -0.06
-3.72 - - -3.49 0.67 2.12 -0.15
-5.42 -6.62 - -5.11 0.74 2.13 -0.16
-1.05 -2.83 - -0.54 -0.3 2.26 -3.74
-6.5 - - -5.76 0.65 2.14 -0.01
Msp_g06499 (MCM9)
-1.26 -1.64 -1.57 -1.62 0.24 1.98 -1.1
Msp_g06755 (RLP29)
- - - - -0.89 2.48 -0.17
- - - - 0.85 2.17 -0.53
-5.2 - -5.81 - 0.45 2.27 -0.37
-11.49 -12.65 -12.27 -12.42 0.94 2.34 -7.67
-4.89 - - - 0.58 1.94 0.71
Msp_g07196 (XTR2)
-1.5 - -8.51 - -0.91 2.0 1.07
Msp_g07265 (XTR8)
-2.09 -3.0 - - -0.89 2.25 0.44
-7.49 - - - 0.69 2.26 -0.77
-3.03 -2.55 -4.03 -2.05 0.73 2.05 -0.71
- - - - 0.97 2.16 -0.81
-5.61 - -8.3 -8.31 -0.02 2.49 -1.46
-2.15 -6.28 -8.44 -6.32 -0.17 2.4 -0.81
-5.21 - - - 0.53 2.12 0.23
Msp_g08322 (CLO1)
-0.75 - - - -0.07 1.95 0.67
-6.73 -9.42 - - 0.21 2.27 -0.01
-9.12 -9.39 - - 0.27 2.31 -0.25
-1.49 -2.08 -1.79 -0.71 0.53 1.81 -0.83
-4.7 - - - 0.19 2.14 0.5
-1.87 -2.1 -4.95 -0.93 0.23 1.8 0.34
- - - - 0.66 2.03 0.43
Msp_g09973 (HVA22F)
-4.35 - -5.74 - 0.16 2.18 0.37
Msp_g10265 (GLP5)
-8.94 -6.32 -6.79 -6.7 0.65 2.3 -1.07
-3.35 -7.95 - - 0.71 1.97 0.43
-4.42 -6.73 -8.66 -8.05 0.6 2.08 0.24
Msp_g10353 (DMP7)
-4.31 - -5.69 - -0.51 1.92 1.29
-3.66 -7.06 -6.05 -8.79 0.34 2.39 -1.35
Msp_g10785 (CRCK2)
-0.19 -0.58 -0.84 -0.38 0.33 1.1 -0.45
-3.54 -5.46 -5.29 -4.69 0.58 1.96 0.52
-3.35 - - - -0.66 1.91 1.32
- - - -8.12 0.81 2.06 0.11
-3.62 - - - 0.5 2.16 0.05
-5.5 - -6.64 - 0.88 2.09 -0.21
-3.27 - - - -0.28 2.17 0.67
-2.13 -5.63 -6.23 -5.62 0.39 2.24 -0.55
-1.46 -2.34 -2.53 -2.2 -0.88 2.39 -1.9
Msp_g12117 (TET2)
-2.69 -4.22 -3.06 -4.03 0.45 2.06 0.09
-7.69 -5.09 -7.91 -5.66 0.64 2.18 -0.26
Msp_g12514 (XCP2)
0.11 -10.85 -9.83 - -1.08 2.08 0.29
Msp_g13240 (RPT1)
-3.72 -4.86 -4.77 -4.64 1.04 2.17 -1.97
-7.04 -4.58 -6.33 -4.39 0.57 2.21 -0.36
-2.17 -1.06 -2.15 -0.83 0.52 1.97 -2.61
- - -2.27 - 0.32 2.41 -2.02
Msp_g15703 (LAC17)
-6.15 - - - -0.58 2.2 0.78
-0.77 -0.95 -1.48 -1.65 -0.23 1.21 1.04
-2.36 -0.62 -2.15 -2.13 -1.34 2.15 -0.21
-1.83 -1.02 -2.57 -1.14 -0.47 1.94 0.08
-1.04 -0.69 -0.8 -0.63 0.38 1.35 -0.28
-0.45 -0.98 -2.08 -0.32 0.57 1.5 -1.34
-0.48 -0.8 -4.07 -0.23 -1.0 1.65 0.2
-1.94 -4.49 -4.43 -3.83 0.16 2.42 -3.44
Msp_g25046 (EIL1)
-0.42 -1.02 -0.98 -0.84 0.3 1.48 -0.56
-1.99 -6.77 - - -0.42 1.92 1.14
-1.96 -1.16 -1.26 -0.97 -0.49 1.72 0.44
- -2.82 - -5.0 -1.27 2.67 -4.6
-2.45 - - - 0.16 2.14 0.36
-0.75 -1.64 -1.95 -1.68 -0.63 1.92 0.11
- - - - -0.03 2.48 -1.18
- - - - -0.83 2.42 0.1
-0.89 -4.32 - -1.53 0.36 2.05 -0.62
-1.67 -6.06 -7.54 -6.96 0.38 2.18 -0.3
-5.73 - - -7.7 -0.74 2.25 0.69
Msp_g28887 (LOB)
-0.53 -1.73 -1.39 -1.33 -1.37 1.87 0.24
-4.07 -1.53 -4.71 -0.74 -0.68 2.18 -0.34
- -1.39 -2.35 -0.77 -0.36 2.02 -0.01
-2.15 -1.09 -2.25 -1.04 -0.45 2.08 -0.6
-2.06 -0.49 -2.67 0.06 -0.87 1.53 0.5
-3.77 - - - -0.9 2.08 1.11
-8.29 -7.52 -8.41 - 0.55 2.4 -2.05
Msp_g29330 (CHAL)
-4.97 - - -3.71 0.57 2.21 -0.39
-2.01 - - - -1.18 2.6 -2.04
Msp_g29400 (CCH)
-1.64 - - - -1.27 2.34 0.26
Msp_g29412 (PAL4)
-0.91 -2.55 -2.49 -2.83 -0.79 2.02 0.42
Msp_g29623 (SRC2)
-6.0 - - - 0.45 1.97 0.77
Msp_g29674 (STIP)
- -6.57 -7.48 - 0.73 2.24 -0.76
-0.95 -3.83 -2.42 -3.85 -0.02 2.29 -1.88
-2.98 -4.2 -5.75 -4.67 -0.73 2.31 0.26
-5.42 - - - 0.77 1.87 0.7
Msp_g29873 (TET8)
-5.96 - - - 0.34 2.16 0.32
- - - - 0.26 2.34 -0.46
Msp_g30064 (RDR1)
-3.41 - - -5.87 -0.2 2.05 0.91
-4.4 -6.95 - - 0.78 1.99 0.34
-2.82 -1.33 -5.96 -1.66 0.29 1.95 0.06
-2.31 -1.16 -2.49 -1.22 0.54 2.06 -2.9
-1.13 -5.14 -6.36 -4.8 -0.07 2.31 -0.86
-1.13 -0.96 -1.44 -0.84 -0.07 1.86 -0.97
-6.73 -8.77 -5.84 -5.78 0.87 2.13 -0.42
Msp_g30638 (EXP15)
-0.55 - -2.45 - -0.29 1.67 1.09
-5.55 -5.8 - -4.74 0.55 2.25 -0.49
-0.46 -3.1 -4.14 -3.81 -0.56 1.97 0.52
- - - - 1.13 2.27 -
-0.99 - - - -1.09 2.59 -
-2.31 - - - -0.31 2.14 0.68
-6.01 -7.46 - - -0.92 2.31 0.58
-4.22 - - - 0.07 2.19 0.4
-2.66 -2.41 -3.26 -3.68 0.01 1.86 0.87
Msp_g32012 (APX3)
-4.89 - - - 0.64 2.06 0.31
-6.87 -4.07 -4.35 -3.37 0.61 2.22 -0.77
-2.17 -3.17 -3.22 -2.47 0.74 1.98 -0.37
-1.5 -1.61 -1.58 -1.5 0.1 1.6 0.6
-0.91 -6.02 - - 0.1 2.35 -1.91
-1.01 -1.69 -1.77 -1.65 0.36 1.98 -1.45
-0.73 -3.3 -0.88 -2.68 0.46 1.98 -1.92
Msp_g32623 (LAC4)
-3.9 -7.72 -6.33 -7.58 -0.29 2.0 1.06
Msp_g32648 (MAN6)
-2.29 -0.5 -1.04 -0.71 -1.14 1.66 0.45
-0.81 -1.44 -1.28 -1.2 0.14 1.83 -0.82
- -4.98 - -0.26 -1.28 2.11 0.49
-0.15 -0.67 -0.78 -1.16 -0.33 1.24 0.36
-3.84 -6.6 -4.9 -4.96 0.71 1.93 0.49
-4.72 - - - 0.43 2.01 0.66
Msp_g35278 (TIP1;1)
-6.57 - -8.2 -9.1 0.05 2.24 0.31
-1.62 - - - 0.65 1.85 0.59
Msp_g36925 (UCC1)
0.19 -2.56 -3.51 -1.87 -0.81 1.82 0.28
-0.28 -0.6 -0.59 -0.65 0.18 1.09 -0.06
Msp_g37413 (XTR2)
-4.3 - - - -1.16 2.0 1.32
- - - - - 2.51 0.39
Msp_g37973 (HVA22F)
- - - - 0.45 2.25 -0.19
Msp_g39536 (LAC2)
-6.6 - - - -0.54 2.17 0.85
- -2.14 -2.83 -3.29 1.17 1.9 -0.84
-2.48 - - - 0.28 2.31 -0.62
-0.22 - -3.72 -1.0 -1.95 1.96 0.5
Msp_g42719 (EXS)
-1.53 -5.18 -4.47 -4.57 -0.67 2.4 -0.63
-1.84 -4.15 -4.47 -3.62 0.23 2.39 -3.16
-0.89 -1.34 -1.42 -1.83 0.02 1.89 -0.54
-3.42 -1.28 -1.92 -1.39 -0.41 2.17 -0.76
-1.8 - -2.98 -2.33 0.52 2.24 -2.16
-0.24 -3.38 -4.5 -3.04 -1.0 2.07 0.25
-2.05 -1.59 -0.43 -1.85 -0.14 1.77 0.13
-2.03 -2.41 -1.9 -2.54 0.34 1.99 -0.18
-3.06 -4.0 -3.61 -2.68 -0.21 1.67 1.34

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.