Aliases : EXP15, ATEXPA15, ATHEXP ALPHA 1.3, ATEXP15, EXPA15
Description : alpha-class expansin & original description: none
Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00009p00266410 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.beta-type expansin | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00012p00230920 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | OrthoFinder output from all 47 species | |
AT1G20190 | ATEXPA11, ATHEXP... | expansin 11 | 0.02 | OrthoFinder output from all 47 species | |
AT3G03220 | ATEXP13,... | expansin A13 | 0.03 | OrthoFinder output from all 47 species | |
AT3G15370 | ATHEXP ALPHA... | expansin 12 | 0.02 | OrthoFinder output from all 47 species | |
AT4G01630 | ATHEXP ALPHA... | expansin A17 | 0.02 | OrthoFinder output from all 47 species | |
AT4G17030 | ATHEXP BETA 3.1,... | expansin-like B1 | 0.02 | OrthoFinder output from all 47 species | |
Als_g02221 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g03581 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g00307 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g33546 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene03749.t1 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene03750.t1 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene03751.t1 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene14225.t1 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0117.g046537 | EXP15, ATEXPA15,... | alpha-class expansin & original description: CDS=74-868 | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g02593 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g11792 | ATEXPA3, EXP3,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g46781 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01004469001 | No alias | Expansin-like B1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01004595001 | ATHEXP BETA 3.1,... | Cell wall.cell wall proteins.expansins.beta-like-type expansin | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01005915001 | ATHEXP BETA 3.1,... | Cell wall.cell wall proteins.expansins.beta-like-type expansin | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01028474001 | ATEXPA25,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01032935001 | ATHEXP ALPHA ... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
Gb_07424 | EXP15, ATEXPA15,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Gb_07439 | EXPA8, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Gb_10700 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.01 | OrthoFinder output from all 47 species | |
Gb_14361 | EXPB3, ATEXPB3,... | beta-class expansin | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g14650.1 | ATEXPA1, EXP1,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g42650.1 | EXPB3, ATEXPB3,... | beta-class expansin | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g01270.1 | ATHEXP BETA 1.4,... | Expansin-B7 OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g06050.1 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g06060.1 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g31480.1 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g44290.1 | ATHEXP BETA 1.1,... | Expansin-B12 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g15840.1 | LOC_Os04g15840 | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g44780.1 | EXPB3, ATEXPB3,... | Expansin-B17 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g19570.1 | LOC_Os05g19570 | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g41700.1 | ATEXPA20,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g30330.1 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g40090.1 | ATHEXP BETA 1.4,... | Expansin-B9 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g40710.1 | ATHEXP BETA 1.4,... | Expansin-B2 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g40730.1 | ATHEXP BETA 1.4,... | Expansin-B4 OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
Len_g49014 | EXPA2, ATHEXP... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g38162 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10425823g0010 | ATEXPA4, ATEXP4,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
MA_418372g0010 | EXPA8, ATHEXP... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species | |
MA_86877g0010 | ATEXPA10,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
Mp1g22700.1 | EXP15, ATEXPA15,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Mp3g09770.1 | ATEXPA1, EXP1,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Ore_g20452 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g27761 | ATEXPA1, EXP1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g27815 | ATEXPA3, EXP3,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g27816 | ATEXPA3, EXP3,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g40782 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g26210 | ATEXPA10,... | alpha-class expansin & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g08562 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0007.g003482 | EXPA8, ATHEXP... | alpha-class expansin & original description: CDS=15-929 | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0014.g006211 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: CDS=682-1482 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0023.g008752 | EXPA2, ATHEXP... | alpha-class expansin & original description: CDS=10-789 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0028.g009901 | ATEXPA10,... | alpha-class expansin & original description: CDS=444-1193 | 0.03 | OrthoFinder output from all 47 species | |
Smo143857 | ATEXPA3, EXP3,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | OrthoFinder output from all 47 species | |
Smo171427 | EXPB3, ATEXPB3,... | Expansin-B17 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
Smo78615 | ATEXP7, EXPA7,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | OrthoFinder output from all 47 species | |
Smo90935 | EXPA16, ATHEXP... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g115310.1.1 | ATHEXP ALPHA ... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g060970.2.1 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Spa_g12972 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g29823 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e007142_P001 | ATEXP13,... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e007438_P001 | EXPB3, ATEXPB3,... | beta-class expansin | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e014247_P001 | ATHEXP ALPHA... | Expansin-A23 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019433_P001 | ATEXPA1, EXP1,... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005875 | microtubule associated complex | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008134 | transcription factor binding | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
MF | GO:0017025 | TBP-class protein binding | IEP | HCCA |
CC | GO:0030286 | dynein complex | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |