Msp_g31321 (AGL16)

Aliases : AGL16

Description : MADS/AGL-type transcription factor & original description: none

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g31321

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00244880	AGL61, DIA,...	RNA biosynthesis.transcriptional activation.MADS box...	0.04	OrthoFinder output from all 47 species
AMTR_s00071p00198970	XAL1, AGL12,...	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
AMTR_s00109p00015260	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
AT2G42830	SHP2, AGL5	K-box region and MADS-box transcription factor family protein	0.02	OrthoFinder output from all 47 species
AT3G30260	AGL79	AGAMOUS-like 79	0.03	OrthoFinder output from all 47 species
AT4G11880	AGL14	AGAMOUS-like 14	0.03	OrthoFinder output from all 47 species
AT5G20240	PI	K-box region and MADS-box transcription factor family protein	0.02	OrthoFinder output from all 47 species
Ala_g37796	AGL2, SEP1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11883	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g18421	AGL42	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g28471	SHP2, AGL5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g61790	AGL6	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g19952	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g22486	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g70933	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene05601.t1	STK, AGL11,...	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene05611.t1	ANR1, AGL44,...	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene12152.t1	AGL42, Aspi01Gene12152	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49755.t1	Aspi01Gene49755	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene49762.t1	GL19, AGL19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene53310.t1	AGL16, Aspi01Gene53310	MADS/AGL-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene54037.t1	Aspi01Gene54037	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene68989.t1	SOC1, AGL20,...	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0014.g013689	No alias	not classified & original description: CDS=279-872	0.03	OrthoFinder output from all 47 species
Azfi_s0016.g014288	No alias	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Azfi_s2186.g109823	No alias	not classified & original description: CDS=5-496	0.04	OrthoFinder output from all 47 species
Cba_g04967	AGL21	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g07874	AGL13	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g47493	AGL16	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.08G048300.1	AGL42, Ceric.08G048300	MADS/AGL-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Ceric.08G048600.1	AGL10, CAL1,...	not classified & original description: pacid=50638045...	0.05	OrthoFinder output from all 47 species
Ceric.12G051800.1	GL19, AGL19,...	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g49223	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g10603	AGL42	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g24818	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g50123	AGL3, SEP4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g13869	AGL6	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01012249001	AGL2, SEP1	RNA biosynthesis.transcriptional activation.MADS box...	0.04	OrthoFinder output from all 47 species
GSVIVT01014093001	No alias	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
LOC_Os01g10504.1	SHP2, AGL5,...	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
LOC_Os06g22760.1	AGL61, DIA,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os12g21850.1	AGL61, DIA,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Len_g22235	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g28933	GL19, AGL19	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_8748850g0010	AGL24	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Msp_g09451	AGL21	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g13457	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g31708	AGL16	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g11366	AGL3, SEP4	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g21242	AGL16	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g21770	AGL65	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g02990	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g10184	AGL16	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g18075	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g19814	AGL10, CAL1, CAL	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g46922	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g58877	AGL30	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g17601	AGL21	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g41504	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003429	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010711	No alias	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sam_g18903	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g21681	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g26111	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g26914	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g27719	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g33302	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g48748	No alias	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Smo437868	AGL29	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
Solyc01g106710.1.1	AGL62, Solyc01g106710	component MED19 of head module of MEDIATOR transcription...	0.03	OrthoFinder output from all 47 species
Solyc04g076280.4.1	AGL24, Solyc04g076280	MADS-box protein SVP OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc12g042015.1.1	AGL62, Solyc12g042015	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Spa_g05918	AGL16	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g16602	AGL16	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g20318	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e018811_P001	AGL14, Zm00001e018811	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Zm00001e034629_P001	AGL9, SEP3,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:2001070	starch binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	115	162
IPR002487	TF_Kbox	190	275

External Links

No external refs found!

Msp_g31321 (AGL16)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation