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  5. Msp_g30406

Msp_g30406


Description : subunit beta of ferredoxin-dependent thioredoxin reductase (FTR) complex & original description: none


Gene families : OG0006015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g30406
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00090p00154050 evm_27.TU.AmTr_v1... Redox homeostasis.chloroplast redox... 0.03 OrthoFinder output from all 47 species
AT2G04700 No alias ferredoxin thioredoxin reductase catalytic beta chain... 0.05 OrthoFinder output from all 47 species
Adi_g040537 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.03 OrthoFinder output from all 47 species
Ala_g02949 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.09 OrthoFinder output from all 47 species
Als_g12839 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.13 OrthoFinder output from all 47 species
Als_g12840 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.04 OrthoFinder output from all 47 species
Aob_g00452 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.04 OrthoFinder output from all 47 species
Aop_g06229 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.03 OrthoFinder output from all 47 species
Azfi_s0242.g059841 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.05 OrthoFinder output from all 47 species
Cba_g08212 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.12 OrthoFinder output from all 47 species
Cba_g08213 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.05 OrthoFinder output from all 47 species
Ceric.32G034200.1 Ceric.32G034200 subunit beta of ferredoxin-dependent thioredoxin... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021589.25 No alias Redox homeostasis.chloroplast redox... 0.03 OrthoFinder output from all 47 species
Cre03.g193950 No alias Redox homeostasis.chloroplast redox... 0.02 OrthoFinder output from all 47 species
Dac_g01873 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.09 OrthoFinder output from all 47 species
Dcu_g11984 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.08 OrthoFinder output from all 47 species
Dde_g41775 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.05 OrthoFinder output from all 47 species
GSVIVT01032540001 No alias Redox homeostasis.chloroplast redox... 0.06 OrthoFinder output from all 47 species
Len_g10435 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.1 OrthoFinder output from all 47 species
Lfl_g41100 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.06 OrthoFinder output from all 47 species
Mp3g11290.1 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.15 OrthoFinder output from all 47 species
Nbi_g00096 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.03 OrthoFinder output from all 47 species
Pir_g58105 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.12 OrthoFinder output from all 47 species
Pnu_g05110 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.03 OrthoFinder output from all 47 species
Pp3c4_19340V3.1 Pp3c4_19340 ferredoxin thioredoxin reductase catalytic beta chain... 0.04 OrthoFinder output from all 47 species
Sam_g15845 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.09 OrthoFinder output from all 47 species
Solyc02g087230.3.1 Solyc02g087230 subunit beta of ferredoxin-dependent thioredoxin... 0.09 OrthoFinder output from all 47 species
Spa_g02059 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.12 OrthoFinder output from all 47 species
Tin_g01422 No alias subunit beta of ferredoxin-dependent thioredoxin... 0.12 OrthoFinder output from all 47 species
Zm00001e036226_P001 Zm00001e036226 subunit beta of ferredoxin-dependent thioredoxin... 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR004209 FTR_bsu 80 180
No external refs found!