Msp_g30400 (TINY2)

Aliases : TINY2

Description : subgroup ERF-IV/DREB2 transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g30400

Target	Alias	Description	ECC score	Gene Family Method
AT2G22200	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
Cba_g06839	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g23766	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os02g45420.1	LOC_Os02g45420	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
LOC_Os04g56150.1	LOC_Os04g56150	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
MA_10020434g0010	No alias	Ethylene-responsive transcription factor ERF013...	0.03	OrthoFinder output from all 47 species
MA_10209922g0010	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
MA_10430769g0010	tny	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_10431882g0010	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_18454g0020	ATERF3, ERF3	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
MA_467593g0010	RAP2.12	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_9068995g0010	No alias	Ethylene-responsive transcription factor ERF016...	0.03	OrthoFinder output from all 47 species
Mp4g17430.1	RAP2.6	Ethylene-responsive transcription factor ERF112...	0.02	OrthoFinder output from all 47 species
Mp5g01050.1	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Mp5g22160.1	ERF110	Ethylene-responsive transcription factor ERF112...	0.02	OrthoFinder output from all 47 species
Nbi_g21132	ORA47	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c3_9430V3.1	ERF2, ATERF2,...	ethylene responsive element binding factor 1	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020656	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Solyc01g005630.3.1	RAP2.11, Solyc01g005630	transcription factor (ERF). transcription factor (ERN1)	0.02	OrthoFinder output from all 47 species
Solyc03g006320.1.1	ATERF4, RAP2.5,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Solyc06g063070.3.1	RAP2.12, Solyc06g063070	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Solyc08g007230.3.1	ERF-1, ATERF-1,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc08g078410.2.1	Solyc08g078410	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Tin_g04619	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g11217	No alias	subgroup ERF-I transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e023159_P001	Zm00001e023159	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e023816_P001	Zm00001e023816	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
MF	GO:0003872	6-phosphofructokinase activity	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007051	spindle organization	IEP	HCCA
MF	GO:0008443	phosphofructokinase activity	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016790	thiolester hydrolase activity	IEP	HCCA
MF	GO:0019200	carbohydrate kinase activity	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0051225	spindle assembly	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
CC	GO:0070652	HAUS complex	IEP	HCCA
BP	GO:0070925	organelle assembly	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	160	209

External Links

No external refs found!

Msp_g30400 (TINY2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation