Msp_g30166


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g30166

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00094190 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.03 OrthoFinder output from all 47 species
AT1G77150 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g069207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22398 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27916 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043495 No alias not classified & original description: CDS=1-2592 0.06 OrthoFinder output from all 47 species
Dcu_g17237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04812 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g05445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08128 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18269 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26301 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g53456 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54484 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15250 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40238 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57550 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57910 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63775 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04624 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48204 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59100 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61335 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Spa_g01551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14979 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23113 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33028 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g33276 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50886 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003876 AMP deaminase activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0032261 purine nucleotide salvage IEP HCCA
BP GO:0032264 IMP salvage IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043101 purine-containing compound salvage IEP HCCA
BP GO:0043173 nucleotide salvage IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0047623 adenosine-phosphate deaminase activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0106380 purine ribonucleotide salvage IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 117 165
IPR002885 Pentatricopeptide_repeat 192 214
No external refs found!