Msp_g28682


Description : not classified & original description: none


Gene families : OG0003649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003649_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g28682
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00070440 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
AT5G15510 No alias TPX2 (targeting protein for Xklp2) protein family 0.07 OrthoFinder output from all 47 species
Adi_g080102 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Als_g15651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15652 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g21234 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene04620.t1 Aspi01Gene04620 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene08613.t1 Aspi01Gene08613 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.02G078000.1 Ceric.02G078000 not classified & original description: pacid=50583911... 0.03 OrthoFinder output from all 47 species
Ceric.10G034200.1 Ceric.10G034200 not classified & original description: pacid=50612324... 0.1 OrthoFinder output from all 47 species
Dcu_g10790 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01011508001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_00785 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g11400.1 LOC_Os03g11400 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g15527 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g27421 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_8291g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp1g24770.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp3g08770.1 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Nbi_g29711 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Ppi_g17903 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc02g066980.1.1 Solyc02g066980 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc02g067100.3.1 Solyc02g067100 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Solyc04g014550.3.1 Solyc04g014550 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g51324 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g44369 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e000831_P002 Zm00001e000831 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e038734_P002 Zm00001e038734 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!