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  5. Msp_g27054

Msp_g27054


Description : not classified & original description: none


Gene families : OG0002106 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g27054

Target Alias Description ECC score Gene Family Method Actions
Adi_g060975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13578 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g32870 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g19249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os12g13660.1 LOC_Os12g13660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g13670.1 LOC_Os12g13670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g05003 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10427217g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g22270.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g01499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25854 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0182.g024903 No alias not classified & original description: CDS=1-2733 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025414 No alias not classified & original description: CDS=1-3054 0.02 OrthoFinder output from all 47 species
Sam_g30138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15324 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017848_P001 Zm00001e017848 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e039656_P002 Zm00001e039656 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!