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  5. Msp_g26540

Msp_g26540 (ARR11)


Aliases : ARR11

Description : subgroup ARR-B transcription factor & original description: none


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g26540
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT4G16110 RR2, ARR2 response regulator 2 0.03 OrthoFinder output from all 47 species
AT4G31920 ARR10, RR10 response regulator 10 0.03 OrthoFinder output from all 47 species
AT5G05090 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g075790 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08573 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34149 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Aob_g06717 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14548 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0041.g026716 ARR1, RR1 subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g26825 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g58278 RR12, ARR12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G008700.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.14G062100.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G058200.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G008400.1 Ceric.31G008400 subgroup ARR-B transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g02359 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04897 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12820 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06166 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08391 LUX, PCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14477 RR14, ARR14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007550001 ARR11 RNA biosynthesis.transcriptional activation.ARR-B... 0.05 OrthoFinder output from all 47 species
GSVIVT01010300001 ARR11 RNA biosynthesis.transcriptional activation.ARR-B... 0.03 OrthoFinder output from all 47 species
MA_7459g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_92689g0020 RR14, ARR14 B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
Mp4g20600.1 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Mp4g21220.1 LUX, PCL1 component LUX of circadian clock Evening complex (EC) 0.03 OrthoFinder output from all 47 species
Ore_g02155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02469 RR2, ARR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00463 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Pir_g59048 ARR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02280 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11087 ARR11 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011863 MYBC1 not classified & original description: CDS=1-1491 0.03 OrthoFinder output from all 47 species
Sam_g06470 No alias subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39543 No alias subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g005140.4.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Solyc10g080960.1.1 Solyc10g080960 Transcription factor MYBC1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g06387 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10934 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24857 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Spa_g47537 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01192 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05145 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.05 OrthoFinder output from all 47 species
Zm00001e000887_P002 ARR1, RR1, Zm00001e000887 B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
Zm00001e016123_P001 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Zm00001e018927_P001 ARR11, Zm00001e018927 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Zm00001e028539_P002 ARR11, Zm00001e028539 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0030410 nicotianamine synthase activity IEP HCCA
BP GO:0030417 nicotianamine metabolic process IEP HCCA
BP GO:0030418 nicotianamine biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072350 tricarboxylic acid metabolic process IEP HCCA
BP GO:0072351 tricarboxylic acid biosynthetic process IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 30 138
IPR001005 SANT/Myb 198 248
No external refs found!