Description : not classified & original description: none
Gene families : OG0001497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001497_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Msp_g26171 | |
Cluster | HCCA: Cluster_71 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g21138 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g28379 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g32208 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g41657 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g62066 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Cba_g36170 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g05708 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g08281 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dde_g24624 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Gb_11513 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g30370.1 | LOC_Os10g30370 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Len_g18833 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g07209 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g20065 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g41477 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g60972 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g08344 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g35972 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g39366 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g10142 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g19702 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g29001 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e004710_P005 | Zm00001e004710 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005730 | nucleolus | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
MF | GO:0008134 | transcription factor binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No external refs found! |