1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g25479

Msp_g25479 (AtALG3, ALG3)


Aliases : AtALG3, ALG3

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0005252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g25479
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Lfl_g18222 AtALG3, ALG3 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000966 RNA 5'-end processing IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
BP GO:0001682 tRNA 5'-leader removal IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0030677 ribonuclease P complex IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0099116 tRNA 5'-end processing IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007873 Glycosyltransferase_ALG3 40 408
No external refs found!