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Description : not classified & original description: none
Gene families : OG0003871 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003871_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g23061 | |
| Cluster | HCCA: Cluster_49 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00142p00090900 | emb2410,... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AT2G25660 | emb2410 | embryo defective 2410 | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g04899 | emb2410 | component *(Tic236) of inner envelope TIC translocation... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g14706 | emb2410 | component *(Tic236) of inner envelope TIC translocation... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g01992 | emb2410 | component *(Tic236) of inner envelope TIC translocation... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene67706.t1 | emb2410, Aspi01Gene67706 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12746 | emb2410 | component *(Tic236) of inner envelope TIC translocation... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15119 | emb2410 | component *(Tic236) of inner envelope TIC translocation... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g09822 | emb2410 | component *(Tic236) of inner envelope TIC translocation... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g23741 | emb2410 | component *(Tic236) of inner envelope TIC translocation... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01035727001 | emb2410 | No description available | 0.05 | OrthoFinder output from all 47 species | |
| Gb_34400 | emb2410 | component Tic236 of inner envelope TIC translocation system | 0.04 | OrthoFinder output from all 47 species | |
| Len_g29844 | emb2410 | component *(Tic236) of inner envelope TIC translocation... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g38744 | emb2410 | component *(Tic236) of inner envelope TIC translocation... | 0.03 | OrthoFinder output from all 47 species | |
| MA_196707g0010 | emb2410 | no description available(sp|f4isl7|ti236_arath : 243.0) | 0.05 | OrthoFinder output from all 47 species | |
| MA_9622984g0010 | emb2410 | no description available(sp|w0ryd3|ssg4_orysj : 192.0) | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02009 | emb2410 | component *(Tic236) of inner envelope TIC translocation... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g40556 | No alias | component *(Tic236) of inner envelope TIC translocation... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g067860.2.1 | emb2410, Solyc08g067860 | component Tic236 of inner envelope TIC translocation system | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g067870.2.1 | emb2410, Solyc08g067870 | no description available(sp|f4isl7|ti236_arath : 953.0) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08438 | emb2410 | component *(Tic236) of inner envelope TIC translocation... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005886 | plasma membrane | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0009306 | protein secretion | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0032940 | secretion by cell | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0035592 | establishment of protein localization to extracellular region | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046903 | secretion | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071692 | protein localization to extracellular region | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| BP | GO:0140352 | export from cell | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |